Category Archives: c_review_articles

Review Articles

Forty years’ trajectory of forage legume species introduction, adaptation, cultivation, and their usage strategies in livestock feeding and farming systems in the semi-arid region of eastern Indonesia: A review

Debora Kana Hau1, Jacob Nulik1*, Simon Peter Field2, Johan Kieft3, Andi Ella1, Syamsu Bahar1, Ali Husni1, Endang Sutedi1, Bess Tiesnamurti1, Juniar Sirait1, Iwan Herdiawan1, Procula Rudlof Matitaputty1

1Research Center for Animal Husbandry, Research Organization for Agriculture and Food, National Research and Innovation Agency of the Republic of Indonesia, Bogor 16911, Indonesia

2Nusa Tenggara Association, Garran 5080, Australia

3United Nations Environment Program (UNEP), Jakarta, Indonesia

 

*Corresponding author’s email: jacob_nulik@yahoo.com

Received: 30 June 2025 / Revised: 18 October 2025 / Accepted: 30 October 2025 / Published Online: 10 November 2025

 

Abstract

 

The semi-arid regions of eastern Indonesia are major contributors to the national beef supply but face persistent feed shortages during prolonged dry seasons. Over the past four decades, the introduction and adaptation of various forage legume species—ranging from tree, shrub, to herbaceous types—have played a vital role in improving feed quality and livestock productivity. The introduction of Leucaena leucocephala in the 1920s and its subsequent expansion in the 1970s significantly transformed the Amarasi cattle fattening system in West Timor. However, the psyllid (Heteropsylla cubana) outbreak in the mid-1980s triggered extensive evaluation of resistant and alternative species such as Leucaena leucocephala cv. Tarramba, Gliricidia sepium, and Acacia angustissima. Parallel trials identified highly adaptable herbaceous and shrub legumes, including Clitoria ternatea, Centrosema pascuorum, Pueraria phaseoloides, Vigna luteola, Desmanthus virgatus, Stylosanthes seabrana, and Desmodium rensonii. This review synthesizes more than forty years of research and field experience through a systematic literature search using Scopus, Google Scholar, and ScienceDirect, complemented by expert field observations and AI-assisted synthesis for enhanced organization and verification. Despite high adaptability and nutritional potential, the adoption of forage legumes by smallholders remains limited due to seed scarcity and technical constraints. Successful models such as the Leucaena-based Amarasi system and legume supplementation strategies have proven effective in improving cattle performance and reducing calf mortality. Future opportunities include the development of community-based seed systems, drone-assisted oversowing, and wider integration of legumes into climate-resilient farming systems.

 

Keywords: Eastern Indonesia, Forage legumes, Leucaena leucocephala, Adaptation, Cultivation, Livestock feeding, Farming systems

Trends in Indigofera research (2016-2025): A bibliometric analysis

Muhammad Jurhadi Kadir1,2, Asmuddin Natsir 3*, Jamila Mustabi4, Muhammad Ihsan A. Dagong5, Syahrullah1

1Department of Agriculture Science, Hasanuddin University, Tamalanrea, Makassar City, South Sulawesi, Indonesia

2Department of Agriculture, Animals and Aquaculture Science, Muhammadiyah Pare-pare University, Pare-pare City, South Sulawesi, Indonesia

3Department of Animal Nutrition, Faculty of Animal Husbandry, Hasanuddin University, Tamalanrea, Makassar City, South Sulawesi, Indonesia

4Feed and Waste Valorization Laboratory, Faculty of Animal Husbandry, Hasanuddin University, Tamalanrea, Makassar City, South Sulawesi, Indonesia

5Animal Breeding Laboratory, Faculty of Animal Husbandry, Hasanuddin University, Tamalanrea, Makassar City, South Sulawesi, Indonesia

 

*Corresponding author’s email: asmuddin_natsir@unhas.ac.id

Received: 31 July 2025 / Revised: 13 October 2025 / Accepted: 23 October 2025 / Published Online: 04 November 2025

 

Abstract

 

This work offers a comprehensive bibliometric review of global Indigofera research published from 2016-2025, analyzing 2,001 documents indexed in Scopus, including journal articles, review papers, book chapters, and conference proceedings. It investigates the evolution of research themes, collaboration trends, and knowledge paradigms over the decade. The study finds a noticeable shift in research focus: earlier studies emphasized ecological and agronomic issues (such as forage quality, nitrogen fixation, species diversity), while recent work highlights phytochemical profiling, antioxidant capabilities, and pharmacological prospects. Collaboration network mapping shows a globally dispersed but highly interconnected institutional dominance, with many contributors remaining fairly isolated. Factorial and cluster analyses underline the interdisciplinary nature of the field, bridging agriculture, ecology, veterinary, and biomedical sciences. Keyword co-occurrence analysis reveals a chronological evolution of topics from traditional fodder and ecological studies to more sophisticated biochemical and pharmacological research. These findings suggest Indigofera plays a dual role in sustainable agriculture and natural product discovery, offering significant implications for food security and human health, with potential applications in livestock productivity, ecological restoration, and pharmaceutical innovation. This review not only maps the current research landscape but also offers a roadmap for future studies, advocating for enhanced interdisciplinary collaboration, advanced biochemical evaluations, and translational research to fully harness Indigofera’s scientific and practical potential.

 

Keywords: Indigofera, Bibliometric analysis, Research trends, Review

Advances and challenges in kiwifruit (Actinidia spp.) genetic improvement: A comprehensive review

Shiming Han1,2, Yuexia Wang1,2*, Yumei Fang1*, Zainab Saeed3, Tanveer Ahmad4, Jihong Dong2, Muhammad Sajjad5*

1School of Biological Sciences and Technology, Liupanshui Normal University, Liupanshui, China

2School of Public Administration, China University of Mining and Technology, Xuzhou, Jiangsu, China

3State Key Laboratory of North China Crop Improvement and Regulation, College of Agronomy, Hebei Agriculture University, Baoding, 071000, China

4Department of Horticulture, Muhammad Nawaz Shareef University of Agriculture, Multan, 60000, Punjab, Pakistan

5Department of Biosciences, COMSATS University Islamabad, Islamabad 45550, Pakistan

 

*Corresponding author’s email: B20160017@cumt.edu.cn; xinxiang324@sohu.com; muhammad.sajjad@comsats.edu.pk

Received: 16 July 2025 / Accepted: 22 September 2025 / Published Online: 13 October 2025

 

Abstract

 

Actinidia spp. (kiwifruit) has transitioned from a regional Chinese fruit to a crop of global economic and nutritional significance. This spread reflects the genus Actinidia’s rich genetic diversity and systematic dissemination efforts. Kiwifruit Commercial production now centers on key regions including China, New Zealand, Italy, and Greece. The fruit’s distinctive nutritional chemistry, marked by exceptionally high concentrations of vitamins C, E, and K, underpins its dietary value. We review the utilization of Actinidia genetic resources as reservoirs for enhancing yield, quality, and resilience. Conventional techniques (selective breeding, interspecific hybridization) and modern biotechnologies are analyzed comparatively, encompassing marker-assisted selection (MAS), genomic selection, and mutagenesis. Emphasis addresses CRISPR-Cas9 transformative capacity for precise editing of disease resistance loci, nutritional biosynthetic pathways, and abiotic stress tolerance genes. These integrative approaches enable development of improved cultivars with optimized yield, organoleptic profiles, enhanced postharvest stability, and climate resilience. Despite these advances, we identify persistent challenges in trait introgression and manipulation of regulatory pathways, proposing doable strategies toward sustainable global production.

 

Keywords: Kiwifruit, Breeding, Genetic diversity, CRISPR/Cas9, Fruit quality, Trait improvement, KASP, MAS

Review on the status of Coral Reefs in the Red Sea

Hassien M. Alnashiri*

Department of Biology, College of Science, Jazan University, P.O. Box. 114, Jazan 45142, Kingdom of Saudi Arabia

 

*Corresponding author’s email: halnashiri@jazanu.edu.sa

Received:16 November 2024 / Accepted:15 April 2025 / Published Online: 27 April 2025

 

Abstract

 

The Red sea has specific unique different features capturing rich biodiversity and aquatic species. The most important geographical and biological values focused on coral reef ecosystems. The shallow regions, as well as the island of Farasan and the tiny islands scattered around it, provide a suitable area for the coral reef distribution and nurture many endemic creatures. This review relied on coral reef association and classification. It dealt with the Red Sea problem and nature with relation to coral reef properties and its impacts. It focused on coral reef threats with future view for economical tourism based on role of coral reefs besides ways for coral reefs conservation. It comprised notes on coral predation, bleaching and diseases. The major hurdle to the coral reefs of this region, resulting in wider areas of coral bleaching, is the rise in temperature due to the global warming phenomenon. This work emphasizes the extent and diversity of red sea corals’ natural and anthropogenic issues faced by the coral ecosystems based on published research and technical reports with scoring reviewed data accompanied with tables and figures. Bar and pie graphs were used to analyze the coral reef data to interpret the actual status for all types presented in different countries. At the end of this investigation, conclusion and prediction of coral reefs status besides recommendations for sustainable development applied on utilization of coral reefs were performed.

 

Keywords: Biodiversity, Coral reefs, Ecology, Red Sea

The effect of nitrogen fertilizer on Napier grass (Pennisetum purpureum) productivity: A meta-analysis

Rahman Rahman1*, Widhi Kurniawan1, Ali Bain1, La Malesi1, Astriana Napirah1, Cecep Hidayat2, Rantan Krisnan2, Achmad Fanindi2, Sajimin Sajimin2, Gresy Eva Tresia2, Harmini Harmini2, Endang Sutedi2, Fitra Aji Pamungkas 2, Slamet Widodo2, Mohammad Miftakhus Sholikin2, Iwan Herdiawan2, Isbandi Isbandi2, Try Zulchi2

1The Faculty of Animal Husbandry, Halu Oleo University, Jl. H.E.A Mokodompit Kampus Anduonohu, 93232, Kendari, Indonesia

2Research Center for Animal Husbandry, Research Organization for Agriculture and Food, National Research and Innovation Agency of The Republic of Indonesia (BRIN), Research Center for Animal Husbandry, Jl. Raya Jakarta-Bogor KM 46, Cibinong, 16911, Bogor, Indonesia

 

*Corresponding author’s email: rahman@uho.ac.id

Received: 08 April 2024 / Accepted: 23 January 2025 / Published Online: 06 March 2025

 

Abstract

 

Nitrogen fertilizer is the major nutrient required by grass for optimal growth and biomass production. The type and dosage of nitrogen fertilizer application influence plant productivity. This research used a meta-analysis approach aimed to assess how optimal N fertilizer dosage and types affect the productivity improvement of Napier grass (Pennisetum purpureum). Search done in Elsevier, Scopus, Science Direct, JSTOR, ProQuest, and Web of Science databases yielded 44 studies, of which 24 were suitable for the analysis. The dataset was collected between 1972 and 2022, and all experiments included a control treatment with no nitrogen fertilizer and a variety of forms (organic or inorganic) that were evaluated herein for the productivity and nutritional contents of Napier grass. The data were then subjected to meta-analysis using a mixed-effects model methodology, treating different doses or forms of nitrogen fertilizer as fixed effects and various studies as random effects, with the p-value used as the statistical model. The findings demonstrated that N fertilizer dosage influences (P<0.05) the total dry weight of forage, leaf weight, plant height, N, P, Na production, and dry matter digestibility. Furthermore, the type of inorganic fertilizer affects (P<0.05) the production of fresh Napier grass forage, leaf weight, and plant height but has no significant impact (P>0.05) on other production parameters. In conclusion, the productivity of Napier grass has the potential to increase effectively with higher doses of nitrogen fertilizer, with the optimal dosage at 1,493.31 kg N/ha/year. Both organic and inorganic types of N fertilizer show similar effects on most of the measured variables.

 

Keywords: Fertilizer, Napier grass, Nitrogen, Meta-analysis, Productivity fertilizer

Pharmaceuticals and their transformation products in environment and plants

Olga I. Lavrukhina1,2*, Vasiliy G. Amelin1,2, Leonid K. Kish1, Dmitry A. Makarov1, Alexey V. Tretyakov1, Elizaveta S. Kozeicheva1, Andrei S. Khishov1, Saidfatima M. Borunova1,3

1The Russian State Center for Animal Feed and Drug Standardization and Quality, 5, Zvenigorodskoye sh., Moscow, 123022 Russia

2Chemistry Department, Vladimir State University named after A.G. and N.G. Stoletov, 87, ul. Gor’kogo, Vladimir, 600000, Russia

3Department of Disease Diagnostics, Therapy, Obstetrics and Animal Reproduction, Moscow State Academy of Veterinary Medicine and Biotechnology – MVA named after K.I. Skryabin, 23, ul. Akademika Skryabina, Moscow, 109472 Russia

Abstract

Antibacterial drugs, analgesics, anti-infective, contrast media, antiepileptics, anti-inflammatory drugs, beta-blockers, and hormones are transferred to the environment from hospital and agricultural effluents, pharmaceutical industrial waste, human and animal excrements from households and sewers. Residues of pharmaceuticals in water and soil cause damage to the ecosystem. Their transformation products could be equally or more toxic and persistent than parent compounds. Some metabolites save biological activity in the environmental objects, including antibacterial activity. The objective of this review is to describe the environmental occurrence, transformation, eco-toxicity, analytical practices, degradation, and removal strategies used to control and prevent environmental contamination by pharmaceuticals (antibiotics, coccidiostatic agents, nonsteroidal anti-inflammatory drugs, beta-adrenomimetics, anthelmintics, hormones). Their determination in routine analysis through simple on-site devices and approaches is of great interest. Instrumental analysis is making progress in the advancement of qualitative and quantitative methods. Gas and liquid chromatography, capillary electrophoresis, and mass spectrometry are commonly used because of their high specificity, simultaneous multicomponent determination opportunities, and low detection limits. Highly sensitive methods generally with accurate mass spectrometric detection are required. High-performance liquid chromatography coupled with high-resolution mass spectrometry is an effective method. The use of green chemistry principles is preferred for both on-site and instrumental analysis, because fewer toxic reagents and solvents are required. The most promising approach for water treatment and manure detoxification is to merge chemical and biological strategies. Persistent pharmaceuticals will be most effectively eliminated by a combination of different treatment technologies.

Keywords: Pharmaceuticals, Water and soil contamination, Veterinary drugs, Manure Determination, Detoxification

Syntenic mapping: A powerful tool for comparative genomics in plants

Ikhlaq Ahmad1, Azeem Iqbal Khan2, Safdar Ali3, Rashid Mehmood Rana1*

1Department of Plant Breeding and Genetics, PMAS-Arid Agriculture University, Rawalpindi, Pakistan

2Department of Plant Breeding and Genetics, University of Agriculture, Faisalabad, Pakistan

3Department of Agronomy, University of Agriculture, Faisalabad, Pakistan

Abstract

Comparative genomics has emerged as a great tool in understanding variations/similarities among various species at molecular level. In classical genetics synteny was used to show that two or more loci are present on same chromosome. Now a day’s synteny is being used to answer questions concerning homeology (the remains of completely homologous chromosomes). Chromosome/genome synteny has been observed in closely related species, having several genes with similar map orders. Synteny is helpful in comparing different genomes. It is used in the study of evolution of genomes, observe functional conservation, help in genome annotation and observe genome assembly errors. Synteny among different genomes can be detected by identification of conserved sequence elements among genomes, comparing the conserved proteins with the help of BLASTP or by the combination of both. Numerous tools are available for the detection of synteny among different genomes. Synteny analysis has been used largely to study complex genomes and helped in discoveries at genomic, chromosomal and gene levels. Syntenic mapping in plant breeding holds promising future prospects.

 

Keywords: Comparative genomics, Synteny, Homeology, Chromosome, Genome, Gene

Exploring the relationship between ABO blood groups and vulnerability to different diseases

Muhammad Imran1&, Ramna Zia2&, Muhammad Aqib Fareed3&, Benish Javed1&, Ali Ahsan4&, Kiran Jalil4, Muhammad Umer Khan5, Hassan Shabbir Chaudhry6, Muhammad Subaan Fareed7, Muhammad Muddassir8, Chaudhry Ahmed Shabbir9*, Zahra Kalim10*

1University Institute of Medical Laboratory Technology, The University of Lahore, Lahore, Pakistan

2Department of Life Sciences, School of Science, University of Management and Technology, Lahore, Pakistan

3Allama Iqbal Medical Collage, Jinnah Hospital, Lahore, Pakistan

4Graduate School of Science, Osaka Metropolitan University, Sugimoto, Sumiyoshi Ward Osaka-558- 0022, Japan

5Institute of Molecular Biology and Biotechnology, The University of Lahore, Lahore, Pakistan

6Department of Medicine and Surgery, Hijaz hospital Gulberg, Lahore, Pakistan

7School of Basic Medical Sciences, Lanzhou University, West Donggang Road 199, Lanzhou, 730000, P. R. China

8Faculty of Science and Engineering, University of Engineering and Technology, Pakistan

9School of Public Health, Faculty of Health and Medical Science, The University of Adelaide, Australia

10Institute of Microbiology, Government College University, Faisalabad, Pakistan

&These authors contributed equally to this work

Abstract

The ABO grouping of blood, comprising the four main types A, B, AB, and O, has been widely recognized for its significance in establishing the suitability of organ transplants and blood transfusions. Recent research has revealed the potential influence of ABO blood types on susceptibility to certain diseases. The current study uses an extensive review of the body of literature and epidemiological investigations to explore the relationships between ABO blood types and disorders that impact various organ systems. The focus lies on chronic ailments, encompassing certain types of cancer as well as cardiovascular, gastrointestinal, and infectious disorders. For example, those with A blood group may exhibit a higher susceptibility to developing peptic carcinoma, whereas individuals with blood type O may demonstrate a lower propensity for cardiovascular issues. The fundamental mechanisms of these interactions remain incompletely understood. The potential causes for the impact of ABO antigens on immunological responses, coagulation factors, inflammation, and interactions with pathogens are still under investigation. The presence of genetic and molecular variations within ABO blood types may contribute to differing susceptibilities to illnesses. This review examines the correlation between ABO blood types and susceptibility to diseases.

Keywords: ABO blood groups, Cardiovascular disease, Cancer, Hypertension, Infectious disease, Malaria

Nanobiosensors: application in healthcare, environmental monitoring and food safety

Qaisar Mahmood1*, Shahida Shaheen2, Muhammad Azeem1

1Department of Biology, College of Science, University of Bahrain, Sakhir 32028, Bahrain

2Department of Environmental Sciences, Kohsar University, Murree, Pakistan

Abstract

This review article summarized the diverse kinds of nanobiosensors along with their uses in healthcare, environmental monitoring, and food safety, while also defining present challenges and opportunities for future investigation and augmentation. In healthcare, for instance, they have been employed for glucose monitoring, cholesterol detection, antibiotic monitoring, and the production of new types of antibiotics that are effective against resistant strains. This enables a highly efficient method that is both accurate and reliable when detecting biomarkers. Nanobiosensors have been overwhelmingly successful in aiding in environmental monitoring. With its ability to effectively screen groundwater, detect pollutants, and monitor toxicity, this emerging technology has become a force to be reckoned with for detecting hazardous substances. Similarly, the food industry has seen remarkable benefits from nanobiosensors as well. The use of nanobiosensors for dynamic food safety monitoring enables prompt detection of dangerous foodborne pathogens and spoilage issues while providing real-time data on the quality of consumables. Even though nanobiosensors possess enormous potential, there are still numerous limitations to overcome.

Keywords: Nanobiosensors, Healthcare, Environmental monitoring, Food safety, Diagnosis, Monitoring, Antibiotics, Pollution

A review on stingless bee (kelulut) honey composition and its contribution to quality of honey products

Muhammad Nur Shazwan Jamzuri, Muhammad Amirun Che Hassan, Fisal Ahmad, Amir Izzwan Zamri, Muhamad Fauzi Mahmud, Shamsul Bahri Abdul Razak, Tuan Zainazor Tuan Chilek*

Faculty of Fisheries and Food Science, Universiti Malaysia Terengganu, 21030 Kuala Nerus, Terengganu, Malaysia

 

Abstract

The kelulut farming industry in Malaysia has experienced exponential growth, driven by the increasing demand for kelulut honey, which can be attributed to the widespread dissemination of information about its benefits. Previously, many researchers worked out on factors responsible on improving the quality of honey. However, the data of honey as a food ingredient and its functions is lacking and should be retrieved in order to have a clear picture on the importance of the specific composition of honey-based products.  The composition of kelulut honey such as sugar contents, acidity, antioxidants, water content, minerals and Hydroxymethylfurfural (HMF) play an important role in determining the quality of kelulut honey. The illustrious Malaysian Standard MS2683: 2017 was firmly established with the noble objective of safeguarding the pristine purity and unparalleled excellence of both raw and processed kelulut honey, assuring their unwavering compliance with the exalted guidelines and unrivalled standards set forth. Generally, the utilization of kelulut honey as a preservative in food products are not fully discovered yet. In addition, the presence of good bacteria such as Lactic Acid Bacteria (LAB) contributes to a special attribute in kelulut honey. However, kelulut honey is also highly susceptible towards harmful bacteria such as Bacillus cereus, Escherichia coli, Staphylococcus and Shigella as reported in previous work. This may occur due to inappropriate handling of the kelulut honey during harvesting. Furthermore, kelulut honey as food ingredient which contains antibacterial value is very useful and can be used in food preservation due to its function in prolonging the shelf life. Therefore, the shelf life of honey and honey-based products are related with the composition, handling practice and the method of storage implementation throughout the food supply chain.

Keywords: Composition, Food ingredient, Food preservation, Kelulut honey, Shelf life