Category Archives: b_original_articles

Original Articles

Proteomic analysis and assessment of heavy metals in hepatopancreas of mud crabs from Setiu and Kuala Sepetang

Nur Syafinaz Mohd Razali1, Nakisah Mat Amin1, Wan Bayani Wan Omar1, Mhd Ikhwanuddin2,

Nurul Huda Abd Kadir1*

1Faculty of Science & Marine Environment, Universiti Malaysia Terengganu, 21030 Terengganu, Malaysia

2Institute of Tropical Aquaculture, Universiti Malaysia Terengganu, 21030 Terengganu, Malaysia

Abstract

Mud crabs are commonly found in Southeast Asia and are in high demand for its nutrients. However, studies reported that estuary areas are easily contaminated with pollutants due to the anthropogenic activities. Hepatopancreas is one of important tissues that involve in food digestions and detoxifications. Glutathione (GSH) and glutathione-S-transferase (GST) play roles in metabolisms of detoxification of xenobiotics. Therefore, this study focuses on the analysis of trace metals in hepatopancreas of mud crabs from Kuala Sepetang (highly contaminated area) and Setiu Wetlands (low contaminated area) and their protein response. Trace metals in hepatopancreas were analyzed by using Inductive Couple Plasma–Mass Spectrometer (ICP-MS). Proteins of hepatopancreas were extracted and GSH activity was measured. Next, protein expressions were observed in 1D electrophoresis and Western blotting. Our results shows that the concentrations of trace metals in hepatopancreas were highly significant in Kuala Sepetang compared with Setiu Wetlands. However, there is no significant difference in GSH activity in both locations. From 1D electrophoresis, the intensity of the protein band at ~60-75 kDa were dense in Kuala Sepetang compared with Setiu with values 15620.23±7829.83 and 3687.83±2933.69 respectively. Based on Western blot result, this protein band was related to GST as the response towards the level of trace metals abundance in the area. This proved that mud crabs in Sepetang location were stressed in polluted areas.
Keywords: Trace metals, Mud crabs, Hepatopancreas, Proteins

Study on genetic variability of blood ark, Anadara cornea at east coast of peninsular Malaysia using random amplified polymorphic DNA: A preliminary assessment

Wan Bayani Wan Omar1*, Faridah Mohamad1, Nurul Eizzati Ibrahim1

1Faculty of Science and Marine Environment, Universiti Malaysia Terengganu, 21030, Kuala Terengganu, Malaysia

Abstract


The genetic variability among individuals of Anadara cornea from Setiu Wetlands, Terengganu was examined by using random amplified polymorphic DNA (RAPD) technique. The genomic DNA was extracted from the clam by using Macherey-Nigel DNA kit and was amplified by RAPD technique with five primers (OPA O3, OPA O9, OPA 17, OPA 19 and OPA 20) for twenty samples of A. cornea. A total of 79 RAPD bands with 78 polymorphic bands (98%) with size ranging from 150-3700 bp were identified from the population indicate that the population of A. cornea has high level of polymorphism due to low inbreeding factor within a population. High polymorphism of A. cornea revealed that this species has genetically variable. The results of this study can be useful to the sustainable management of wild stocks of this species. Further study should be done for a better understanding about variation and also for conservation and management of this species.
Keywords: Anadara sp, Blood ark, Clam, Genetic variability, RAPD, Setiu Wetland

Stevioside content in stingless bee (Heterotrigona itama) honey in Stevia farming

Shamsul Bahri Abd Razak*, Azmi Ismun, Siti Asma Samsuddin

Apis and Meliponine Research Group, Faculty of Fisheries and Food Science, Universiti Malaysia Terengganu, 21030 Kuala Terengganu, Malaysia

 

Abstract

A study on the efficacy of stingless bee (Heterotrigona itama) rearing in Stevia rebaudiana farming was conducted at Pusat Tunas Stevia (PTS), Kampung Tempinis, Jabi, Terengganu from January until December 2015. Integration honey of stingless bee and stevia is a new approach in honey industry. Stingless bee colonies were placed in stevia farm so that, stingless bee roamed and visited for nectar collection naturally thus produced natural stevia stingless bee honey. The combination of honey and stevia which is high in nourishment is good for health with enhancement of its sweetness. The objective of this research was to produce the designer stingless bee honey that contained stevioside, a compound from stevia. Peak of stevioside was detected at retention time 1.383 via High Performance Liquid Chromatography (HPLC) analysis and peaks with identical retention time found in samples. Stingless bees also foraged nectar from herb such as stevia plant by proving the stevioside content in stingless bee honey. In conclusion, this study can help the community to improve their lifestyle and income indirectly, by increase value of honey and can export to abroad and contribute a lot of benefits to many sectors in Malaysia such as stingless bee keeper and government to increase the economy of honey sector.                                                                      Keywords: Stevia, Stingless bee, Stevioside, Kelulut, Terengganu

Development of mud crab breeding technology for conservation and communal livelihoods in the Setiu Wetlands, Terengganu, Malaysia

Tran Nguyen Duy Khoa1,2*, Faizah Shaharom Harrison2

1Department of Coastal Aquaculture, College of Aquaculture and Fisheries, Can Tho University, Can Tho city, Viet Nam

2Faculty of Fisheries and Food Science, Universiti Malaysia Terengganu, 21030 Kuala Nerus, Terengganu, Malaysia

Abstract

Setiu Wetlands is located along the Terengganu coastline which comprises various ecosystems providing a suitable natural environment for breeding and grow out of various organisms. The mud crab is considered to be one of the important natural resources and a source of income for the local community in the Setiu Wetlands. The aim of this study is to develop the breeding and larviculture technology of mud crab (Scylla paramamosian) for conservation and livelihood activities in Setiu Wetland. The matured broodstock of mud crab was collected from Setiu Wetland and transferred to AKUATROP hatchery in Universiti Malaysia Terengganu for the breeding experiments. After eyestalk ablation, crabs were separately cultured in 50L dark tanks with sandy bottom connected with recirculating systems and fed trash fish and with blood cockle twice a day. After egg spawning, ovigerous crabs were moved to incubated tanks with continuous aeration and not fed until hatching. Strong phototactic larvae were collected and stocked in 500L tanks at 300inds/L of density. The crab larvae were fed Artemia from Zoea 1 to Zoea 3, and intergraded artificial feed from Zoea 4. After megalope metamorphosis, larvae were transferred to larger tanks with substrates. The results showed that 80-90% of broodstock spawned eggs after 50 days of maturation culture. The larvae took 23 to 27 days to complete the ontogenetic development with 5 -10% of crablet survival rate. These results could contribute to crab conservation and livelihood activities in Setiu Wetlands.
Keywords: Mud crab, Breeding, Larviculture, Conservation, Scylla paramamosian

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Inhibitory effect of various fungicides on mycelial growth of Alternaria alternata; cause of Alternaria leaf spot disease on Rosa Indica L. in Pakistan

Muhammad Asim1*, Yasir Iftikhar1, Muhammad Arshad2,3, Sonum Bashir4, Mohsin Raza1, Saqib Bilal5, Faheema Bakhtawar1

1Department of Plant Pathology, College of Agriculture, University of Sargodha, Sargodha, Pakistan

2Department of Entomology, College of Agriculture, University of Sargodha, Sargodha, Pakistan

3Department of Plant Protection, Faculty of Agriculture, Ankara University, Daskapi, Ankara, Turkey

4Department of Plant Pathology, PMAS University of Arid Agriculture, Rawalpindi, Pakistan

5College of Plant Protection, Nanjing Agriculture University, Nanjing, China

Abstract

Rosa indica L. (family: Rosaceae) is an important and widely grown plant in the floriculture industry. Alternaria leaf spot disease of rose was observed in rose plantation at College of Agriculture, University of Sargodha, Sargodha. The study was carried out to isolate and purify the pathogen, which was identified as Alternaria alternata. Additionally, in vitro efficacy of five fungicides; success, copper oxychloride, metalaxyl+mancozeb, topsin M and kumulus against A. alternata were tested by using food poisoning technique. Three concentrations (100, 200 and 300 ppm) of each fungicide were used. Mycelial growth after 3rd, 5th and 7th day was measured. All the fungicides significantly inhibited the mycelial growth of A. alternata. Among those, metalaxyl+mancozeb was the most effective as compared to others. Maximum inhibition was observed after 3rd (89%), 5th (91.6%) and 7th (93.3) day by metalaxyl+mancozeb followed by success 43.3%, 41.0% and 29.6% respectively.  After 3rd and 5th day copper oxychloride was least effective with 19.6% and 9.6% mycelial inhibition respectively while after 7th day the minimum 4.3% mycelial inhibition was observed by topsin M instead of copper oxychloride. Therefore, A. alternata is responsible for alternaria leaf spot disease of rose and metalaxyl+mancozeb was found to be the most effective fungicide against A.alternata in vitro.

Keywords: Rose, Mycelial growth, Alternaria alternata, Management

The addition of fish Salmon Omega-3 in tris egg yolk diluents on the quality of Simmental bull frozen semen

Wilmientje Marlene Mesang Nalley1*, Tri Sukma Adhe Meidina2, Asep Kurnia3, Raden Iis Arifiantini2

1Department of Animal Production and Technology, Faculty of Animal Science, Nusacendana University. Jl. Adisucipto, Penfui, Kupang, NTT 85001, Indonesia

2Department of Veterinary Cinic, Reproduction and Pathology, Faculty of Veterinary Medicine, Bogor Agricultural University. Jl Agatis Raya Kampus IPB Dramaga, Bogor 16680, Indonesia

3Lembang Artificial Insemination Centre, Lembang, Bandung, Jl. Kayu ambon, Lembang, Bandung, Jawa Barat 40391, Indonesia

Abstract

The sperm plasma membrane is drastically altered by cryopreservation. Therefore, it is necessary to protect the sperm plasma membrane during the cryopreservation process. Omega-3 is a supplement that can protect plasma membrane. This study aimed to compare the quality of Simmental bull frozen semen in Tris Egg Yolk (TEY) diluents with and without omega-3. Semen samples from five Simmental bulls belonged to Lembang Artificial Insemination Center (AIC) were collected using artificial vaginas. The semen samples were evaluated immediatelly (macro and microscopically) after collection. The semen samples then divided into two tubes and diluted with TEY or  TEY with Omega-3 (TEYO) diluents respectively. The semen were packed into 0.25 mL straws and equilibrated at 5 ℃ for 4 hours and froze using automatic freezing machine and stored in liquid nitrogen tank (-196 oC) for further evaluation. The quality of  frozen semen were evaluated after 24 hours of storage. The data were analyzed using independent sample T-test. The results showed that the sperm post-thawing motility in TEY and TEYO diluents were 45.17±1.98% and 47.48±3.55%, respectivelly. No significant difference between TEY and TEYO (P>0.05) was found in the sperm motility, individual score, sperm viability as well as membrane integrity. The research conclude that omega-3 supplementation in Tris egg yolk did not improve the semen quality of Simmental bull after freezing.

Keywords: Frozen semen, Tris egg yolk, Omega-3, Simmental bull, Sperm

Silicon application improve maize (Zea mays L.) performance through ionic homeostasis and ameliorating adverse effects of brackish water

Muhammad Jan1*, Muhammad Anwar ul Haq2, Tanveer ul Haq3, Anser Ali4, Muhammad Yousaf1, Saqib Bashir1, Shahbaz Khan4

1Department of Soil and Environmental Sciences, Faculty of Agricultural Sciences, Ghazi University, Dera Ghazi Khan, Pakistan

2Institute of Soil and Environmental Sciences, University of Agriculture, Faisalabad, Pakistan

3Department of Soil and Environmental Sciences, Muhammad Nawaz Sharif, University of Agriculture, Multan Pakistan

4Department of Agronomy, Faculty of Agricultural Sciences, Ghazi University, Dera Ghazi Khan, Pakistan

Abstract

Water scarcity is an alarming issue in arid and semi arid regions of Pakistan, which cause drought stress and reduced plant growth. A pot experiment was conducted to study the effective role of Si for the growth of maize hybrids (FH-922, FH-949, FH-988 and FH-1137) with brackish water application. The physical parameters like plant height, shoot fresh weight, shoot dry weight; number of leaves per plant and chlorophyll contents (SPAD Value) were recorded. The ionic parameters like sodium (Na), potassium (K), silicon (Si) concentration and K: Na ratio were also recorded. The results revealed a relatively different response of four maize hybrids among all the studied parameters. Among all the variable maize hybrids, FH-988 showed the considerable increase in plant height; shoot fresh and dry weight and leaf chlorophyll contents. However, maize hybrids FH-922 and FH-1137 were more sensitive as compared to FH-988 and FH-949 due to less production in dry matter, chlorophyll contents, K concentration and K: Na ratio.

Keywords: Chlorophyll contents, Hybrids, Potassium, K:Na ratio

Assessment of variability in performances of F3 rice populations on inland swampland in Indonesia

Mohammad Chozin*, Sumardi Sumardi

1Faculty of Agriculture, University of Bengkulu, Jl. WR Supratman, Kandang Limun,  City of Bengkulu, Bengkulu Province, 38126, Indonesia

Abstract

Rice improvement program for swampland areas is mainly addressed to develop high yielding varieties with the desirable agronomic characteristics along with the improved adaptability to all growth limiting factors inherent in the ecosystem. This study was implemented to evaluate the growth and yield performances of 10 rice F3 populations generated from the crosses involving Bengkulu swamp rice landraces (Hanafi Putih, Batubara, Harum Curup, Tigo-tigo, and Lubuk Durian) and the cultivated varieties (Diah Suci, Bestari, and Sidenuk) on a swampland. The experiment was laid out on a shallow inland swamp with stagnant inundation up to 50 cm depth during the plant growth period. Data were collected for plant height, tiller number, number of productive tillers clump-1, heading date, maturity date, panicle length, number of grain panicle-1, 100-grain weight, and grain yield clump-1. High variability among the populations was observed for most of the traits and readily explored for the development of rice varieties well adapted to swampland. The principal component analysis showed that the populations were distinguishable on the basis of the observed traits. The magnitude of broad sense heritability and genetic advance estimates denoted that simple phenotypic selection should be sufficient for gaining genetic improvement for the majority of the traits, excluding panicle length.

Keywords: Genetic advance, Heritability, Inland swamp, Local rice varieties, Principal component

Role of salicylic acid and ascorbic acid in alleviating the harmful effects of water stress in Maize (Zea mays L.)

Muhammad Qasim1, Mudassir Aziz1*, Fahim Nawaz1, Muhammad Arif2

1Department of Agronomy, Muhammad Nawaz Shareef University of Agriculture, Multan, Pakistan

2Department of Soil and Environmental Sciences, Muhammad Nawaz Shareef University of Agriculture, Multan, Pakistan

Abstract

Water scarcity is threatening productivity of crops throughout the globe. Different osmoprotectants such as salicylic acid and ascorbic acid have potential to mitigate the harmful effects of water deficit. Current study was conducted to examine the possible role of salicylic acid and ascorbic acid individually and in combination in improving the yield and yield components of maize (Zea mays L.) exposed to drought at different growth stages. Drought was imposed by skipping irrigation at two water sensitive crop growth stages i.e. 6 fully expanded leaves (V6 as per Feekes scale) and initiation of silking (R1 as per Feekes scale). Water deficit significantly decreased cob diameter (19.2%), cob weight (13.8%), grain rows per cob (14.4%), cob length (12.8%), 1000- grain weight (6.2%), stover yield (17.7%), grain yield (10.6%), biological yield (8.2) as compared to normal irrigation. Drought imposed at R1 (as per Feekes scale) was more lethal in terms of reduction in different yield and yield components including 1000-grain weight, grain yield and biological yield by 0.2, 6.9 and 0.9 %, respectively. Exogenous application of combination of salicylic acid + ascorbic acid @ 0.5mM each + tween 20 (0.1%) applied at V6 stage (as per Feekes scale) was more effective in mitigating the harmful effects of water deficit by improving cob diameter (6%) biological yield (1%) and grain yield of maize (6.9%) as compared to drought imposed at R1(as per Feekes scale).

Keywords: Ascorbic acid, Drought, Maize, Salicylic acid, Yield

Comparative leaf and stem anatomy of ten Piper species from Indonesia

Laurentius Hartanto Nugroho1*, Sutikno1, Ratna Susandarini1, Indah Rafika Yuliati1, Yosep Priyono1, Esti Munawaroh2, Inggit Puji Astuti2

1Faculty of Biology, Universitas Gadjah Mada, Indonesia

2Center for Plant Conservation, Bogor Botanical Garden, Indonesian Institute for Sciences, Indonesia

Abstract

The genus Piper with over 700 species distributed in tropical and subtropical areas of the world has a considerable number of species with economic importance as spices and herbal medicine. In this study the anatomical characters of leaf and stem on 10 species of Piper from Bogor Botanical Garden, Indonesia were observed in relation with their function as oil-accumulating organs. The objective of this study was to explore the anatomical variability among species. Observations on anatomical characters were done on leaf epidermal and cross section as well as stem cross section prepared using paraffin embedding method. Results indicated that there were structural variations on the epidermal features, mesophyll, secretory cells and secretory cannals of leaves, as well as variation on the ratio of medullary and peripheral vascular bundles on stem. Results of this study provide additional taxonomic evidence to confirm differences between Piper species, and serve as supporting data for identification based on internal structures. Data on the comparative anatomy of leaf and stem also contributes to the selection of the right materials for the extraction of essential oils from various Piper species based on the presence of secretory cells.

Keywords: Piper, Plant internal structure, Medicinal plant, Taxonomic evidence